org.imirsel.m2k.transforms
Class ApplyFishersLinearDiscriminantTransform

java.lang.Object
  java.util.Observable
      ncsa.d2k.core.modules.RootModule
          ncsa.d2k.core.modules.ConfigurableModule
              ncsa.d2k.core.modules.EmbeddedPipeModule
                  ncsa.d2k.core.modules.ExecModule
                      ncsa.d2k.core.modules.ComputeModule
                          org.imirsel.m2k.transforms.ApplyFishersLinearDiscriminantTransform

All Implemented Interfaces:

java.lang.Cloneable, ncsa.d2k.core.modules.Module, java.io.Serializable, ncsa.d2k.core.modules.SystemModule

public class ApplyFishersLinearDiscriminantTransform

extends ncsa.d2k.core.modules.ComputeModule

Applys a multiClassLinearDiscriminantAnalysis transform to novel inputs in the form of an array of Signal objects. The transformed data is output.

Author:

kw

See Also:

Serialized Form

Field Summary

Fields inherited from class ncsa.d2k.core.modules.ConfigurableModule

addedInputInfo, addedInputNames, addedInputTypes, addedOutputInfo, addedOutputNames, addedOutputTypes, addPortListeners

Fields inherited from class ncsa.d2k.core.modules.RootModule

alias, children, DEBUG_LEVEL, EMPTY_INPUT, ERROR_LEVEL, executionManager, FATAL_LEVEL, HAVE_INPUT, INFO_LEVEL, iPipes, iPipesIndex, iTriggers, oPipes, oPipesIndex, oTriggers, parents, pipesFullManager, stats, triggerChildren, triggerParents, WARN_LEVEL

Fields inherited from interface ncsa.d2k.core.modules.SystemModule

BLOCKED_STATE, IDLE_STATE, MEDIUM, MEDIUM_RARE, MEDIUM_WELL, RARE, READY_STATE, WELL, WORKING_STATE

Constructor Summary

ApplyFishersLinearDiscriminantTransform()
Creates a new instance of ApplyFishersLinearDiscriminantModel

Method Summary

void	beginExecution() Clears variable before the module is run
protected void	doit() Applys a multiClassLinearDiscriminantAnalysis transform to novel inputs in the form of an array of Signal objects.
java.lang.String	getInputInfo(int param) Returns a text description for the indicated input
java.lang.String	getInputName(int i) Returns a text name for the indicated output
java.lang.String[]	getInputTypes() Returns an array of strings containing the Java data types of the input.
java.lang.String	getModuleInfo() Returns information about the module
java.lang.String	getOutputInfo(int param) Returns a text description for the indicated output
java.lang.String	getOutputName(int i) Returns a text name for the indicated output
java.lang.String[]	getOutputTypes() Returns an array of strings containing the Java data types of the outputs.
boolean	isReady() A method that allows the module to run based on the input flags

Methods inherited from class ncsa.d2k.core.modules.ExecModule

execute, setExecutionManager

Methods inherited from class ncsa.d2k.core.modules.ConfigurableModule

addAddPortListener, addInput, addInputTrigger, addOutput, addOutputTrigger, getAddedInputTypes, getAddedOutputTypes, getAddPortListeners, insertInput, insertOutput, removeAddPortListener, removeInput, removeInputTrigger, removeOutput, removeOutputTrigger, setAddedInputTypes, setInputType, setOutputType

Methods inherited from class ncsa.d2k.core.modules.RootModule

activateTriggers, begin, canRun, clone, debug, debug, disconnectInputPipe, disconnectInputTriggers, disconnectOutputPipe, disconnectOutputTriggers, end, endExecution, error, error, fatal, fatal, fetchInputs, getAlias, getChildIndex, getChildMux, getChildren, getExecutionManager, getFile, getFlags, getFullPipeManager, getGuiComponent, getImage, getInputPipes, getInputPipeSize, getInputTriggers, getModuleName, getModuleStatistics, getNumInputs, getNumOutputs, getOutputCounts, getOutputPipes, getOutputPipeSize, getOutputTriggers, getParentIndex, getParentMux, getParents, getPipesFull, getPriority, getPropertiesDescriptions, getPropertyEditor, getResource, getRootName, getState, info, info, initModule, isAborting, isHead, isInputPipeConnected, isOutputPipeConnected, pullInput, pushOutput, resetInputs, setAlias, setBlocked, setD2KModulesLoggingLevel, setFlags, setFullPipeManager, setIdle, setInputPipe, setLogLevel, setModuleStatistics, setModuleStatisticsByMachine, setOutputCounts, setOutputPipe, setPipesFull, setReady, setResource, setState, setThePriority, setWorking, trigger, triggersActivated, warn, warn

Methods inherited from class java.util.Observable

addObserver, clearChanged, countObservers, deleteObserver, deleteObservers, hasChanged, notifyObservers, notifyObservers, setChanged

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ApplyFishersLinearDiscriminantTransform

public ApplyFishersLinearDiscriminantTransform()

Creates a new instance of ApplyFishersLinearDiscriminantModel

Method Detail

beginExecution

public void beginExecution()

Clears variable before the module is run

isReady

public boolean isReady()

A method that allows the module to run based on the input flags

Returns:

returns a boolean flag indicating whether the module can run.

doit

protected void doit()
             throws java.lang.Exception

Applys a multiClassLinearDiscriminantAnalysis transform to novel inputs in the form of an array of Signal objects. The transformed data is output.

Throws:

java.lang.Exception - if an error occurs.

getInputInfo

public java.lang.String getInputInfo(int param)

Returns a text description for the indicated input

Parameters:

param - the index of the input

Returns:

a text description of the indexed input

getInputTypes

public java.lang.String[] getInputTypes()

Returns an array of strings containing the Java data types of the input.

Returns:

the fully qualified java types for each of the inputs

getInputName

public java.lang.String getInputName(int i)

Returns a text name for the indicated output

Parameters:

i - the index of the output

Returns:

the name of the indexed output

getModuleInfo

public java.lang.String getModuleInfo()

Returns information about the module

Returns:

Module information

getOutputInfo

public java.lang.String getOutputInfo(int param)

Returns a text description for the indicated output

Parameters:

param - the index of the output

Returns:

the text description for the indicated output

getOutputTypes

public java.lang.String[] getOutputTypes()

Returns an array of strings containing the Java data types of the outputs.

Returns:

the fully qualified java types for each of the outputs.

getOutputName

public java.lang.String getOutputName(int i)

Returns a text name for the indicated output

Parameters:

i - the index of the output

Returns:

the name of the indexed output