Serialized Form

Package org.imirsel.m2k.evaluation

Class org.imirsel.m2k.evaluation.AudioTempoExtractionEvaluator extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

ModelName

java.lang.String ModelName

The model name

copyToDirectory

java.lang.String copyToDirectory

Directory to store evaluation data in

verbose

boolean verbose

verbose output flag

GTSignals

java.util.Vector GTSignals

store for ground-truth signals

DetSignals

java.util.Vector DetSignals

store for detected signals

numberOfResultSets

int numberOfResultSets

number of result sets

receivedGroundTruth

boolean receivedGroundTruth

flag indicating whether ground truth has been received

receivedDetectedSignals

boolean receivedDetectedSignals

flag indicating whether detected signals have been received

Class org.imirsel.m2k.evaluation.ClassificationResultRead extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

examples

Signal[] examples

numExamples

int numExamples

verbose

boolean verbose

Class org.imirsel.m2k.evaluation.DrumDetectionEvaluator extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

tolerance

double tolerance

detectorName

java.lang.String detectorName

receivedGroundTruth

boolean receivedGroundTruth

receivedDetectedSignals

boolean receivedDetectedSignals

copyToDirectory

java.lang.String copyToDirectory

GTSignals

java.util.Vector GTSignals

DetSignals

java.util.Vector DetSignals

verbose

boolean verbose

Class org.imirsel.m2k.evaluation.KeyFindingAccuracy extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

ModelName

java.lang.String ModelName

copyToDirectory

java.lang.String copyToDirectory

verbose

boolean verbose

accuracyStore

java.util.Vector accuracyStore

GTSignals

java.util.Vector GTSignals

DetSignals

java.util.Vector DetSignals

numberOfResultSets

int numberOfResultSets

receivedGroundTruth

boolean receivedGroundTruth

receivedDetectedSignals

boolean receivedDetectedSignals

Class org.imirsel.m2k.evaluation.McNemarsTest extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

sigStore

java.util.Vector sigStore

outputDirectory

java.lang.String outputDirectory

evaluationName

java.lang.String evaluationName

verbose

boolean verbose

flag indicating whether debug output should be sent to the console

Class org.imirsel.m2k.evaluation.MelodySimilarityEvaluator1 extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

numQueries

int numQueries

outputDirectory

java.lang.String outputDirectory

evalFileExt

java.lang.String evalFileExt

signalFileExt

java.lang.String signalFileExt

verbose

boolean verbose

numberOfResultSets

int numberOfResultSets

receivedGroundTruth

boolean receivedGroundTruth

queries

java.util.Vector queries

groundTruth

java.util.HashMap groundTruth

totalRelevant

int totalRelevant

algResult

java.util.HashMap algResult

totalRetrieved

int totalRetrieved

storedNormRec

java.util.TreeMap storedNormRec

storedAvgPrec

java.util.TreeMap storedAvgPrec

storedRPrec

java.util.TreeMap storedRPrec

storedADR

java.util.TreeMap storedADR

storedDetail

java.util.HashMap storedDetail

Class org.imirsel.m2k.evaluation.MelodyTranscriptionEvaluator extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

tolerance

double tolerance

detectorName

java.lang.String detectorName

receivedGroundTruth

boolean receivedGroundTruth

receivedDetectedSignals

boolean receivedDetectedSignals

copyToDirectory

java.lang.String copyToDirectory

GTSignals

java.util.Vector GTSignals

DetSignals

java.util.Vector DetSignals

verbose

boolean verbose

Class org.imirsel.m2k.evaluation.OnsetDetectionEvaluator extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

tolerance

double tolerance

detectorName

java.lang.String detectorName

receivedGroundTruth

boolean receivedGroundTruth

receivedDetectedSignals

boolean receivedDetectedSignals

copyToDirectory

java.lang.String copyToDirectory

GTSignals

java.util.Vector GTSignals

DetSignals

java.util.Vector DetSignals

verbose

boolean verbose

Class org.imirsel.m2k.evaluation.RankAlgorithms extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

sigStore

java.util.Vector sigStore

outputDirectory

java.lang.String outputDirectory

evaluationName

java.lang.String evaluationName

verbose

boolean verbose

Class org.imirsel.m2k.evaluation.ReadDrumDetectionTextFile extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

verbose

boolean verbose

readingState

int readingState

wavFiles

java.util.Vector wavFiles

onsetData

java.util.Vector onsetData

transcriptionData

java.util.Vector transcriptionData

metaDataLabel_Onsets

java.lang.String metaDataLabel_Onsets

metaDataLabel_Labels

java.lang.String metaDataLabel_Labels

metaDataLabel_Transcription

java.lang.String metaDataLabel_Transcription

count

int count

Class org.imirsel.m2k.evaluation.ReadKeyTextFile extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

verbose

boolean verbose

readingState

int readingState

wavFiles

java.util.Vector wavFiles

metaDataLabel

java.lang.String metaDataLabel

count

int count

Class org.imirsel.m2k.evaluation.ReadMelodyExtractionTextFile extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

verbose

boolean verbose

timeInc

double timeInc

columnLabel

java.lang.String columnLabel

readingState

int readingState

wavFiles

java.util.Vector wavFiles

count

int count

Class org.imirsel.m2k.evaluation.ReadOnsetTextFile extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

verbose

boolean verbose

readingState

int readingState

wavFiles

java.util.Vector wavFiles

onsetData

java.util.Vector onsetData

count

int count

Class org.imirsel.m2k.evaluation.ReadTempoExtractionTextFile extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

verbose

boolean verbose

readingState

int readingState

wavFiles

java.util.Vector wavFiles

metaDataLabel

java.lang.String metaDataLabel

count

int count

Class org.imirsel.m2k.evaluation.SignalArrayAccuracy extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

classNames

java.util.Vector classNames

resultSignals

java.util.Vector resultSignals

hierarchies

java.util.Vector hierarchies

truthIndices

java.util.Vector truthIndices

classificationIndices

java.util.Vector classificationIndices

ModelName

java.lang.String ModelName

resultFileExt

java.lang.String resultFileExt

signalFileExt

java.lang.String signalFileExt

storageDirectory

java.lang.String storageDirectory

classHierarchyFile

java.lang.String classHierarchyFile

storedConfusion

int[][] storedConfusion

accuracyStore

java.util.Vector accuracyStore

hierAccStore

java.util.Vector hierAccStore

numberOfResultSets

int numberOfResultSets

verbose

boolean verbose

Class org.imirsel.m2k.evaluation.SignTest extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

sigStore

java.util.Vector sigStore

outputDirectory

java.lang.String outputDirectory

evaluationName

java.lang.String evaluationName

outputFileExt

java.lang.String outputFileExt

verbose

boolean verbose

flag indicating whether debug output should be sent to the console

Class org.imirsel.m2k.evaluation.StudentTTest extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

sigStore

java.util.Vector sigStore

outputDirectory

java.lang.String outputDirectory

evaluationName

java.lang.String evaluationName

outputFileExt

java.lang.String outputFileExt

verbose

boolean verbose

flag indicating whether debug output should be sent to the console

Package org.imirsel.m2k.filters

Class org.imirsel.m2k.filters.MelFilterBank extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

numFilters

int numFilters

lowestFreq

double lowestFreq

highestFreq

double highestFreq

FilterBank

double[][] FilterBank

mn

int mn

mx

int mx

receivingData

boolean receivingData

fss

java.lang.Integer fss

fs

int fs

fl

double fl

fh

double fh

p

int p

oldn

int oldn

Class org.imirsel.m2k.filters.OnePoleFilter extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

coef

double coef

maintainState

boolean maintainState

old

double old

Class org.imirsel.m2k.filters.OneZeroFilter extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

coef

double coef

maintainState

boolean maintainState

old

double old

Class org.imirsel.m2k.filters.SpectralContrastFilter extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

numFilters

int numFilters

Variable to hold number of filters used in filterbank

lowestFreq

double lowestFreq

Lowest frequency used in filterbank

highestFreq

double highestFreq

Highest frequency used in filterbank

alpha

double alpha

distance variable used to calculate spectral contrast

useBase10

boolean useBase10

Flag indicating whether base 10 logs should be used or base e.

FilterBank

double[][] FilterBank

mn

int mn

mx

int mx

oldn

int oldn

receivingData

boolean receivingData

fss

java.lang.Integer fss

fs

int fs

distance

int distance

Package org.imirsel.m2k.io

Class org.imirsel.m2k.io.CreateFileListForClass extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

ClassName

java.lang.String ClassName

List

FileListWithClass List

announced

boolean announced

Class org.imirsel.m2k.io.CreateSignalList extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

ClassName

java.lang.String ClassName

signals

java.util.Vector signals

announced

boolean announced

Class org.imirsel.m2k.io.CreateSignals extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

ClassName

java.lang.String ClassName

signals

java.util.Vector signals

announced

boolean announced

Class org.imirsel.m2k.io.FileListWithClass extends java.lang.Object implements Serializable

Serialized Fields

className

java.lang.String className

fileList

java.lang.String[] fileList

listSize

int listSize

Class org.imirsel.m2k.io.InputSignalArrays extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

usePropertiesFile

boolean usePropertiesFile

propertiesFile

java.lang.String propertiesFile

currentSignalsForArray

java.util.Vector currentSignalsForArray

outputting

boolean outputting

outputPosition

int outputPosition

currentClass

java.lang.String currentClass

theList

Signal[] theList

names

java.util.Vector names

classNames

java.util.Vector classNames

recurseSubDirs

java.util.Vector recurseSubDirs

substringFileFilters

java.util.Vector substringFileFilters

excludeFileFilters

java.util.Vector excludeFileFilters

getNameFrom

java.util.Vector getNameFrom

Class org.imirsel.m2k.io.InputSignals extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

usePropertiesFile

boolean usePropertiesFile

propertiesFile

java.lang.String propertiesFile

outputting

boolean outputting

outputPosition

int outputPosition

currentClass

java.lang.String currentClass

theList

Signal[] theList

names

java.util.Vector names

classNames

java.util.Vector classNames

recurseSubDirs

java.util.Vector recurseSubDirs

substringFileFilters

java.util.Vector substringFileFilters

excludeFileFilters

java.util.Vector excludeFileFilters

getNameFrom

java.util.Vector getNameFrom

Class org.imirsel.m2k.io.Print1DDArray extends ncsa.d2k.core.modules.OutputModule implements Serializable

Serialized Fields

CSVFormat

boolean CSVFormat

Disable

boolean Disable

Label

java.lang.String Label

Class org.imirsel.m2k.io.Print2DDArray extends ncsa.d2k.core.modules.OutputModule implements Serializable

Serialized Fields

PrintDimensions

boolean PrintDimensions

Display dimensions

PrintValues

boolean PrintValues

Format values for display

Disable

boolean Disable

Disable flag

Label

java.lang.String Label

Label used when printing out arrays

Class org.imirsel.m2k.io.ReadCachedSignal extends ncsa.d2k.core.modules.OutputModule implements Serializable

Serialized Fields

extension

java.lang.String extension

forceRecalculation

boolean forceRecalculation

waitingForFeatureExtraction

int waitingForFeatureExtraction

queue

java.util.Vector queue

verbose

boolean verbose

Class org.imirsel.m2k.io.ReadMarsyas01FeatureFiles extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

path

java.lang.String path

filename

java.lang.String filename

hasRun

boolean hasRun

showDebug

boolean showDebug

Class org.imirsel.m2k.io.ReadSerializedSignalArrays extends ncsa.d2k.core.modules.OutputModule implements Serializable

Serialized Fields

verbose

boolean verbose

Class org.imirsel.m2k.io.ReadSerializedSignalOject extends ncsa.d2k.core.modules.OutputModule implements Serializable

Class org.imirsel.m2k.io.SignalToFileObject extends ncsa.d2k.core.modules.DataPrepModule implements Serializable

Serialized Fields

verbose

boolean verbose

Class org.imirsel.m2k.io.SignalWaveRead extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

DisplayProperties

boolean DisplayProperties

HeaderSize

int HeaderSize

BytesPerSample

int BytesPerSample

AudioFile

java.io.File AudioFile

dataLength

int dataLength

NumSamples

int NumSamples

lastPosition

long lastPosition

value1L

int value1L

value2L

int value2L

value3L

int value3L

value1R

int value1R

value2R

int value2R

value3R

int value3R

signedValue

double signedValue

scalingFactor

double scalingFactor

numChannels

int numChannels

SampleRate

int SampleRate

LeftSamples

double[] LeftSamples

RightSamples

double[] RightSamples

Class org.imirsel.m2k.io.StreamDirectoryFiles extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

state

int state

j

int j

DirectoryPath

java.lang.String DirectoryPath

FileNameFilter

java.lang.String FileNameFilter

Class org.imirsel.m2k.io.StreamFilesFromFileListFile extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

state

int state

hasRun

boolean hasRun

Class org.imirsel.m2k.io.WaveGenerator extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

numSamples

int numSamples

amplitude

double amplitude

numWaves

double numWaves

Class org.imirsel.m2k.io.WaveRead extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

FrameSize

int FrameSize

DisplayProperties

boolean DisplayProperties

Buffered

boolean Buffered

HeaderSize

int HeaderSize

BytesPerSample

int BytesPerSample

AudioFile

java.io.File AudioFile

dataLength

int dataLength

NumSamples

int NumSamples

lastPosition

long lastPosition

value1L

int value1L

value2L

int value2L

value3L

int value3L

value1R

int value1R

value2R

int value2R

value3R

int value3R

signedValue

double signedValue

scalingFactor

double scalingFactor

numChannels

int numChannels

SampleRate

long SampleRate

Count

int Count

NumFrames

int NumFrames

buffer

byte[] buffer

LeftSamples

double[] LeftSamples

RightSamples

double[] RightSamples

Class org.imirsel.m2k.io.Write1DDoubleArraysToFiles extends ncsa.d2k.core.modules.OutputModule implements Serializable

Serialized Fields

pathToFile

java.lang.String pathToFile

ext

java.lang.String ext

fileNum

int fileNum

Class org.imirsel.m2k.io.Write1DDoubleArrayToFile extends ncsa.d2k.core.modules.OutputModule implements Serializable

Serialized Fields

pathToFile

java.lang.String pathToFile

Class org.imirsel.m2k.io.Write1DDoubleArrayToTable extends ncsa.d2k.core.modules.OutputModule implements Serializable

Class org.imirsel.m2k.io.Write2DDoubleArraysToFiles extends ncsa.d2k.core.modules.OutputModule implements Serializable

Serialized Fields

delimChar

java.lang.String delimChar

pathToFile

java.lang.String pathToFile

ext

java.lang.String ext

count

int count

Class org.imirsel.m2k.io.Write2DDoubleArrayToFile extends ncsa.d2k.core.modules.OutputModule implements Serializable

Serialized Fields

delimChar

java.lang.String delimChar

pathToFile

java.lang.String pathToFile

Class org.imirsel.m2k.io.WriteFileListForSignalArray extends ncsa.d2k.core.modules.OutputModule implements Serializable

Serialized Fields

fileName

java.lang.String fileName

workingDir

java.lang.String workingDir

fileExt

java.lang.String fileExt

omitClassName

boolean omitClassName

count

int count

Class org.imirsel.m2k.io.WriteFileListsToTextFile extends ncsa.d2k.core.modules.DataPrepModule implements Serializable

Serialized Fields

FileName

java.lang.String FileName

UseIntegerLabels

boolean UseIntegerLabels

ClassNames

java.lang.String[] ClassNames

NumClasses

int NumClasses

ClassesReceived

int ClassesReceived

lists

FileListWithClass[] lists

WorkingDir

java.lang.String WorkingDir

Class org.imirsel.m2k.io.WriteSignalArraysToTable extends ncsa.d2k.core.modules.OutputModule implements Serializable

Serialized Fields

currentArray

Signal[] currentArray

currentPosition

int currentPosition

Mtable

ncsa.d2k.modules.core.datatype.table.MutableTable Mtable

table

ncsa.d2k.modules.core.datatype.table.Table table

numRows

int numRows

numCols

int numCols

mtableNumRows

int mtableNumRows

className

java.lang.String className

pathName

java.lang.String pathName

startcase

boolean startcase

Class org.imirsel.m2k.io.WriteSignalToTable extends ncsa.d2k.core.modules.OutputModule implements Serializable

Package org.imirsel.m2k.math

Class org.imirsel.m2k.math.Abs extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.math.Angle extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.math.Centroid extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.math.DifferenceBetweenFrames extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

lastFrame

double[] lastFrame

Class org.imirsel.m2k.math.ElementAdd extends ncsa.d2k.core.modules.OrderedReentrantModule implements Serializable

Class org.imirsel.m2k.math.ElementMultiply extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.math.Entropy extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

detectionFn

double[] detectionFn

currentSize

int currentSize

histogramBins

int histogramBins

calculateDiffs

boolean calculateDiffs

Class org.imirsel.m2k.math.Flux extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

old_frame

double[] old_frame

Class org.imirsel.m2k.math.HalfWaveRectifier extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

threshold

double threshold

Class org.imirsel.m2k.math.HistogramDoubleArray extends ncsa.d2k.core.modules.OutputModule implements Serializable

Serialized Fields

numBins

int numBins

Class org.imirsel.m2k.math.InnerProduct extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.math.LinearRegression extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

oldFrames

double[][] oldFrames

regressionLength

int regressionLength

xx

double xx

x_av

double x_av

Class org.imirsel.m2k.math.Log extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

LogZeroValue

double LogZeroValue

Class org.imirsel.m2k.math.Log10 extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

LogZeroValue

double LogZeroValue

Class org.imirsel.m2k.math.Log2 extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

LogZeroValue

double LogZeroValue

Class org.imirsel.m2k.math.Magnitude extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.math.Mean extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.math.MeanArray extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

rawValues

double[] rawValues

currentSize

int currentSize

windowFrames

int windowFrames

centreWindowOnFrame

boolean centreWindowOnFrame

Class org.imirsel.m2k.math.MeanSpread extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

detectionFn

double[] detectionFn

currentSize

int currentSize

windowFrames

int windowFrames

centreWindowOnFrame

boolean centreWindowOnFrame

Class org.imirsel.m2k.math.MedianDynamicThreshold extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

thresholdWeight

double thresholdWeight

windowLength

int windowLength

peakIsolationWindow

int peakIsolationWindow

outputAsDoubles

boolean outputAsDoubles

Class org.imirsel.m2k.math.Norm extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

NormType

java.lang.String NormType

p

double p

Class org.imirsel.m2k.math.NormaliseFunction extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

minusOneRange

boolean minusOneRange

Class org.imirsel.m2k.math.PhaseDeviation extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

lastFrame

double[] lastFrame

lastlastFrame

double[] lastlastFrame

Class org.imirsel.m2k.math.Pow extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

exponent

double exponent

Class org.imirsel.m2k.math.ScalarMultiply extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

Gain

double Gain

Class org.imirsel.m2k.math.SignalMeanandVariance extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

useOnsetDetection

boolean useOnsetDetection

useSilenceGate

boolean useSilenceGate

appendSegmentLength

boolean appendSegmentLength

keepOnsetCol

boolean keepOnsetCol

windowSize

int windowSize

Class org.imirsel.m2k.math.SpectralRollOff extends ncsa.d2k.core.modules.OrderedReentrantModule implements Serializable

Class org.imirsel.m2k.math.Spread extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

detectionFn

double[] detectionFn

currentSize

int currentSize

Class org.imirsel.m2k.math.Sqrt extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.math.StreamMeanAndVariance extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

NumObjectsInStream

int NumObjectsInStream

maintainNulls

boolean maintainNulls

outputstate

int outputstate

nullTriggered

boolean nullTriggered

count

int count

maxCount

int maxCount

DoubleArrays

double[][] DoubleArrays

data

double[] data

length

int length

Class org.imirsel.m2k.math.SumArray extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

rawValues

double[] rawValues

currentSize

int currentSize

windowFrames

int windowFrames

centreWindowOnFrame

boolean centreWindowOnFrame

Class org.imirsel.m2k.math.Variance extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.math.ZeroCrossings extends ncsa.d2k.core.modules.OrderedReentrantModule implements Serializable

Package org.imirsel.m2k.modelling

Class org.imirsel.m2k.modelling.ApplyGaussianModel extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

model

Gaussian model

theData

double[][] theData

exampleLabels

int[] exampleLabels

classNames

java.lang.String[] classNames

Class org.imirsel.m2k.modelling.ApplySignalGaussian extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

model

SignalGaussian model

theSignals

Signal[] theSignals

Class org.imirsel.m2k.modelling.Gaussian extends java.lang.Object implements Serializable

Serialized Fields

ClassifierName

java.lang.String ClassifierName

numClasses

int numClasses

isTrained

boolean isTrained

vars

double[][] vars

covars

double[][] covars

means

double[][] means

Class org.imirsel.m2k.modelling.GaussianTrainer extends ncsa.d2k.core.modules.OrderedReentrantModule implements Serializable

Class org.imirsel.m2k.modelling.SignalGaussian extends java.lang.Object implements Serializable

Serialized Fields

ClassifierName

java.lang.String ClassifierName

numClasses

int numClasses

isTrained

boolean isTrained

vars

double[][] vars

covars

double[][] covars

means

double[][] means

classNames

java.util.Vector classNames

Class org.imirsel.m2k.modelling.SignalGaussianTrainer extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Package org.imirsel.m2k.modelling.linearDiscriminantAnalysis

Class org.imirsel.m2k.modelling.linearDiscriminantAnalysis.ApplyFishersLinearDiscriminantModel extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

model

multiClassLinearDiscriminantAnalysis model

theSignals

Signal[] theSignals

Class org.imirsel.m2k.modelling.linearDiscriminantAnalysis.multiClassLinearDiscriminantAnalysis extends java.lang.Object implements Serializable

Serialized Fields

isTrained

boolean isTrained

class_members

int[] class_members

prior_prob

double[] prior_prob

transformed_means

double[][] transformed_means

transform_matrix

double[][] transform_matrix

classNames

java.util.Vector classNames

Class org.imirsel.m2k.modelling.linearDiscriminantAnalysis.TrainFishersLinearDiscriminantModel extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Package org.imirsel.m2k.my_modules

Class org.imirsel.m2k.my_modules.Template extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

myDoubleParameter

double myDoubleParameter

myStringParameter

java.lang.String myStringParameter

Package org.imirsel.m2k.testing

Class org.imirsel.m2k.testing.GenerateImpulse extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

length

int length

Class org.imirsel.m2k.testing.GenerateRamp extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

length

int length

Class org.imirsel.m2k.testing.GenerateTriggerStream extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

Stop

boolean Stop

NumTriggers

int NumTriggers

Count

long Count

firstTime

boolean firstTime

Class org.imirsel.m2k.testing.GenerateWhiteNoise extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

length

int length

mean

double mean

var

double var

Package org.imirsel.m2k.transforms

Class org.imirsel.m2k.transforms.ApplyFishersLinearDiscriminantTransform extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

model

multiClassLinearDiscriminantAnalysis model

theSignals

Signal[] theSignals

Class org.imirsel.m2k.transforms.DCT extends ncsa.d2k.core.modules.OrderedReentrantModule implements Serializable

Serialized Fields

numCoefs

int numCoefs

keepFirstCoef

boolean keepFirstCoef

DCTMatrix

double[][] DCTMatrix

oldp

int oldp

i

int i

j

int j

Class org.imirsel.m2k.transforms.FFT extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

weightFft

double[] weightFft

weightFftTimesFrom2

double[] weightFftTimesFrom2

inverse

boolean inverse

Class org.imirsel.m2k.transforms.FFTReal extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

weightFft

double[] weightFft

weightFftTimesFrom2

double[] weightFftTimesFrom2

inverse

boolean inverse

Class org.imirsel.m2k.transforms.PCA extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

useSVD

boolean useSVD

A flag indicating whether the EigenValue decomposition or the SingularValue decomposition should be used to perform the PCA.

percentageVariance

double percentageVariance

basisVectors

double[][] basisVectors

inPlace

boolean inPlace

storedObj

java.lang.Object storedObj

useExistingTransform

boolean useExistingTransform

A flag indicating whether an existing transform should be taken as input and applied.

usePerClassTransform

boolean usePerClassTransform

A flag indicating whether a covariance matrix should be calculated for each class and averaged (normalising contribution from each class) or whether a global covariance matrix should be calculated. Requires "class" metadata to be set.

Class org.imirsel.m2k.transforms.TrainAndApplyFishersLinearDiscriminantTransform extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Package org.imirsel.m2k.util

Class org.imirsel.m2k.util.Accuracy extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

WorkingDir

java.lang.String WorkingDir

Class org.imirsel.m2k.util.AddIntMetadataToSignal extends ncsa.d2k.core.modules.DataPrepModule implements Serializable

Serialized Fields

key

java.lang.String key

signalStore

Signal signalStore

forwardNulls

boolean forwardNulls

Class org.imirsel.m2k.util.AppendArrayToSignal extends ncsa.d2k.core.modules.DataPrepModule implements Serializable

Serialized Fields

columnName

java.lang.String columnName

signalStore

Signal signalStore

Class org.imirsel.m2k.util.AppendMatrixStreamToSignal extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

theSignal

Signal theSignal

count

int count

columnNamePrefix

java.lang.String columnNamePrefix

Class org.imirsel.m2k.util.AppendTimeStampsToSignal extends ncsa.d2k.core.modules.DataPrepModule implements Serializable

Class org.imirsel.m2k.util.Collect1DDArrayStreamInto2DDArray extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

arrays

java.util.Vector arrays

Class org.imirsel.m2k.util.CollectSignals extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

signals

java.util.Vector signals

classNames

java.util.Vector classNames

nullsReceived

int nullsReceived

outputting

boolean outputting

outputtingstate

int outputtingstate

output

Signal[][] output

currentArray

int currentArray

numArraysExpected

int numArraysExpected

nullTerminateStream

boolean nullTerminateStream

Class org.imirsel.m2k.util.CollectSignalsInto1SignalPerClass extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

signals

java.util.Vector signals

classNames

java.util.Vector classNames

nullsReceived

int nullsReceived

outputting

boolean outputting

output

Signal[] output

currentArray

int currentArray

numArraysExpected

int numArraysExpected

Class org.imirsel.m2k.util.Concatenate1DDArrays extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.util.Concatenate1DDArrayStream extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

arrays

java.util.Vector arrays

totalSize

int totalSize

Class org.imirsel.m2k.util.CopyMetadataFromSignal extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

metadataKey

java.lang.String metadataKey

Metadata to copy.

Class org.imirsel.m2k.util.CopyMetadataFromSignalArray extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

metadataKey

java.lang.String metadataKey

Metadata key to copy.

Class org.imirsel.m2k.util.CreateTestAndTrainSets extends ncsa.d2k.core.modules.DataPrepModule implements Serializable

Serialized Fields

TestFileName

java.lang.String TestFileName

TrainFileName

java.lang.String TrainFileName

TrainingProportion

double TrainingProportion

UseIntegerLabels

boolean UseIntegerLabels

ClassNames

java.lang.String[] ClassNames

NumClasses

int NumClasses

ClassesReceived

int ClassesReceived

lists

FileListWithClass[] lists

WorkingDir

java.lang.String WorkingDir

numArraysExpected

int numArraysExpected

Class org.imirsel.m2k.util.CreateTestandTrainSignalArrays extends ncsa.d2k.core.modules.DataPrepModule implements Serializable

Serialized Fields

TrainingProportion

double TrainingProportion

inputSignals

java.util.Vector inputSignals

Class org.imirsel.m2k.util.DeleteDataFromSignal extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.util.DeleteDataFromSignalArrays extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.util.DownSample extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

downFactor

int downFactor

phase

int phase

ph

int ph

maintainState

boolean maintainState

Class org.imirsel.m2k.util.Enframe extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

FrameSize

int FrameSize

The frame size to be used.

verbose

boolean verbose

IncrementSize

int IncrementSize

The increment size to be used.

Count

int Count

data

double[] data

TotalLength

int TotalLength

NumTimes

int NumTimes

NumFrames

int NumFrames

Class org.imirsel.m2k.util.ExternalIntegrationModule extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

MainCommand

java.lang.String MainCommand

OutputFilename

java.lang.String OutputFilename

WorkingDir

java.lang.String WorkingDir

AddExtensionToInput

boolean AddExtensionToInput

Extension

java.lang.String Extension

commandFormattingStr

java.lang.String commandFormattingStr

isRunning

boolean isRunning

inputStream

java.io.InputStream inputStream

errorStream

java.io.InputStream errorStream

outfile

java.lang.String outfile

process

java.lang.Process process

MaxBufferSize

int MaxBufferSize

OutputBuffer

byte[] OutputBuffer

OutputBufferIndex

int OutputBufferIndex

Class org.imirsel.m2k.util.IntArrayAccuracy extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

name

java.lang.String name

Class org.imirsel.m2k.util.Length extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.util.MatlabIntegrationModule extends ExternalIntegrationModule implements Serializable

Serialized Fields

matlabArgs

java.lang.String matlabArgs

stderr

java.io.BufferedReader stderr

stdout

java.io.BufferedReader stdout

verbose

boolean verbose

Class org.imirsel.m2k.util.MatlabTwoInputIntegrationModule extends TwoInputExternalIntegrationModule implements Serializable

Serialized Fields

matlabArgs

java.lang.String matlabArgs

stderr

java.io.BufferedReader stderr

stdout

java.io.BufferedReader stdout

verbose

boolean verbose

Class org.imirsel.m2k.util.NFoldCrossvalidatedSignalArrays extends ncsa.d2k.core.modules.DataPrepModule implements Serializable

Serialized Fields

seed

int seed

N

int N

inputSignals

java.util.Vector inputSignals

totalProportions

int[] totalProportions

NumExamples

int NumExamples

NumClasses

int NumClasses

classTotals

int[] classTotals

partition

int[][] partition

proportions

int[][] proportions

rnd

java.util.Random rnd

currentFold

int currentFold

Class org.imirsel.m2k.util.noMetadataException extends java.lang.Exception implements Serializable

Class org.imirsel.m2k.util.PopulateSignal extends ncsa.d2k.core.modules.DataPrepModule implements Serializable

Serialized Fields

receivingData

boolean receivingData

currentSignal

Signal currentSignal

data

java.util.Vector data

columnNamePrefix

java.lang.String columnNamePrefix

Class org.imirsel.m2k.util.Signal extends java.lang.Object implements Serializable

Serialized Fields

data

double[][] data

The data matrix.

metadata

java.util.HashMap metadata

The metadata hashmap.

Class org.imirsel.m2k.util.Stereo2Mono extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Class org.imirsel.m2k.util.StreamColumnsOfSignalOut extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

theData

double[][] theData

count

int count

removeFromSignal

boolean removeFromSignal

Class org.imirsel.m2k.util.StreamSignalsFromArray extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

signalArrays

java.util.Vector signalArrays

currentArray

Signal[] currentArray

currentPosition

int currentPosition

outputtingstate

int outputtingstate

Class org.imirsel.m2k.util.StripMetadataFromSignalArrays extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

produceCopy

boolean produceCopy

A flag indicating whether metadata should be stripped from the original Signal Object, or whether it should be cloned and the clone stripped of data.

metadataKey

java.lang.String metadataKey

The key of the metadata to copy.

verbose

boolean verbose

Class org.imirsel.m2k.util.StripMetadataFromSignals extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

produceCopy

boolean produceCopy

A flag indicating whether metadata should be stripped from the original Signal Object, or whether it should be cloned and the clone stripped of data.

metadataKey

java.lang.String metadataKey

The key of the metadata to copy.

Class org.imirsel.m2k.util.TranscriptionMapper extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

verbose

boolean verbose

Indicates whether debug info is output to the console.

mappingFilePath

java.lang.String mappingFilePath

metaDataLabelToMapOn

java.lang.String metaDataLabelToMapOn

metaDataLegend

java.lang.String metaDataLegend

Class org.imirsel.m2k.util.Truncate1DDArray extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

DesiredLength

int DesiredLength

Length to truncate vector to.

Class org.imirsel.m2k.util.TwoInputExternalIntegrationModule extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

MainCommand

java.lang.String MainCommand

OutputFilename

java.lang.String OutputFilename

WorkingDir

java.lang.String WorkingDir

AddExtensionToInput

boolean AddExtensionToInput

Extension

java.lang.String Extension

commandFormattingStr

java.lang.String commandFormattingStr

isRunning

boolean isRunning

inputStream

java.io.InputStream inputStream

errorStream

java.io.InputStream errorStream

outfile

java.lang.String outfile

process

java.lang.Process process

MaxBufferSize

int MaxBufferSize

OutputBuffer

byte[] OutputBuffer

OutputBufferIndex

int OutputBufferIndex

Class org.imirsel.m2k.util.UpSample extends ncsa.d2k.core.modules.OrderedReentrantModule implements Serializable

Serialized Fields

upFactor

int upFactor

Class org.imirsel.m2k.util.Window extends ncsa.d2k.core.modules.ComputeModule implements Serializable

Serialized Fields

WindowName

java.lang.String WindowName

Window type to use.

Class org.imirsel.m2k.util.ZeroPad extends ncsa.d2k.core.modules.OrderedReentrantModule implements Serializable

Serialized Fields

DoubleLength

boolean DoubleLength

When true, the array length is doubled with the second half being filled with zeros. the Desired Length property is ignored.

DesiredPaddedArraySize

int DesiredPaddedArraySize

Desired padded array size.

Package org.imirsel.m2k.vis

Class org.imirsel.m2k.vis.Histogram extends ncsa.d2k.core.modules.InputModule implements Serializable

Serialized Fields

UserSpecifiedMin

double UserSpecifiedMin

UserSpecifiedMax

double UserSpecifiedMax

ComputeMinAndMax

boolean ComputeMinAndMax

WaitTimeInMilliSeconds

long WaitTimeInMilliSeconds

disableLabels

boolean disableLabels

XSize

int XSize

YSize

int YSize

HalfXSize

int HalfXSize

HalfYSize

int HalfYSize

Colors

java.awt.Color[] Colors

mainFrame

Histogram.DoubleBufferingFrame mainFrame

Class org.imirsel.m2k.vis.Histogram.DoubleBufferingFrame extends java.awt.Frame implements Serializable

Serialized Fields

offDimension

java.awt.Dimension offDimension

offImage

java.awt.Image offImage

offGraphics

java.awt.Graphics offGraphics

object

java.lang.Object object

ClassLabels

java.lang.String[] ClassLabels

TopMarginSize

int TopMarginSize

BottomMarginSize

int BottomMarginSize

LeftMarginSize

int LeftMarginSize

RightMarginSize

int RightMarginSize